Adding files has its limits (I was able to import only 20 files, more were ignored).
I realized that I was adding libraries (different symbol than normal folder) at the moment when I was about to commit new library ( it asked to commit all libraries which are part of the library).
Another one, how to add new page to the cookbook. Here's an explanation, google was not my friend in the beginning:
mbed cookbook [http://mbed.org/cookbook]
Create new link (an example http://mbed.org/cookbook/my_new_link), start editing.